Table Info

Table 2.

A whole repertoire of miRNA resources

Databases	Organism	Specification	Weblink	References
miRNAMap	Human, rat, fly, worm, chicken, mouse	miRNAs and target genes experimentally verified	http://mirnamap.mbc.nctu.edu.tw/	[99, 100]
microRNA.org	Human, mouse	Target predictions of miRNA	http://www.microrna.org	[101]
PMTED	Plants	Microarray studies have revealed expression patterns of miRNA targets	http://pmted.agrinome.org	[95]
MtiBase	Human, mouse	miRNA-binding sites located at 5’ UTR/CDS	http://mtibase.sysu.edu.cn	[102]
miRGator	Human	Expression profiles, miRNA diversity, target relationship	http://mirgator.kobic.re.kr	[103, 104]
SomamiR DB 2.0	Human	Somatic-mutations in miRNAs and their target-site in cancer	http://compbio.uthsc.edu/SomamiR	[105]
PhenomiR	Human	Expression of miRNAs differentially regulated in diseases	http://mips.helmholtz-muenchen.de/phenomir	[106]
DIANA miRGen v3.0	Human, rat, mouse	Cell line specific genes transcription-start-sites (TSSs) of miRNA	http://www.microrna.gr/mirgen	[107]
PASmiR	Plants	A Web-accessible and literature-curated database	http://hi.ustc.edu.cn:8080/PASmiR	[108]
DIANA TarBase	Animals, plants, virus	Experimentally validated miRNA and gene interactions	http://www.microrna.gr/tarbase	[109]
miR2Disease	Human	Deregulation of miRNAs in various human diseases	http://www.mir2disease.org/	[110]
mimiRNA	Human	Expressions-profile data of miRNA over various cell lines and tissues	http://mimirna.centenary.org.au	[111]
StarBase	Human, mouse	miRNAs, competing endogenous RNAs (ceRNAs), pan-cancer and interactions network of long ncRNAs and mRNAs from a large-scale CLIP-sequence data	http://starbase.sysu.edu.cn/	[112, 113]

Declarations

Acknowledgments

We are thankful to the Department of Biotechnology Jaypee Institute of Information Technology, NOIDA, INDIA for providing the technical support.

Author contributions

CKJ and PS contributed in design of the work, analysis, interpretation of data, writing - original draft, and writing - review & editing; CKJ also contributed in supervision and conceptualization; AKP, NS, RSK contributed in data curation, validation, and visualization; All authors contributed to manuscript revision, read and approved the submitted version.

Conflicts of interest

The authors declare that they have no conflicts of interest.

Ethical approval

Not applicable.

Consent to participate

Not applicable.

Consent to publication

Not applicable.

Availability of data and materials

Not applicable.

Funding

Not applicable.

Copyright

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