Sequence alignment of viral/bacterial mimicry peptides that stimulate MBP-specific T cell clones that are DQ1 or DR2 restricted [9]
Peptides recognized by clone Hy.1B11 (DO1 restricted) | |||||||||||||||
85 | 90 | 94 | 99 | ||||||||||||
MBP(85–99) | E | N | P | V | V | H | F | F | K | N | I | V | T | P | R |
Herpes simplex, UL15 protein | F | R | Q | L | V | H | F | V | R | D | F | A | Q | L | L |
Adenovirus type 12, ORF | D | F | E | V | V | T | F | L | K | D | V | L | P | E | F |
Pseudomonas, phosphomannomutase | D | R | L | L | M | L | F | A | K | D | V | V | S | R | N |
Human papillomavirus type 7, L2 protein | I | G | G | R | V | H | F | F | K | D | I | S | P | I | A |
Peptides recognized by clone Hy.1G11 (DR2 restricted) | |||||||||||||||
85 | 90 | 94 | 99 | ||||||||||||
MBP(85–99) | E | N | P | V | V | H | F | F | K | N | I | V | T | P | R |
EBV, DNA polymerase | T | G | G | V | Y | H | F | V | K | K | H | V | H | E | S |
Influenza type A, hemagglutinin | Y | R | N | L | V | W | F | I | K | K | N | T | R | Y | P |
Reovirus type 3, sigma 2 protein | M | A | R | A | A | F | L | F | K | T | V | G | F | G | G |
Peptides recognized by clone Hy.1G11 (DR2 restricted) | |||||||||||||||
85 | 90 | 94 | 99 | ||||||||||||
MBP(85–99) | E | N | P | V | V | H | F | F | K | N | I | V | T | P | R |
EBV, DNA polymerase | T | G | G | V | Y | H | F | V | K | K | H | V | H | E | S |
Influenza type A, hemagglutinin | Y | R | N | L | V | W | F | I | K | K | N | T | R | Y | P |
Herpes simplex, DNA polymerase | G | G | R | R | L | F | F | V | K | A | H | V | R | E | S |
ORF: open reading frame; EBV: Epstein-Barr virus
Note. Reprinted from “Molecular mimicry in T cell-mediated autoimmunity: viral peptides activate human T cell clones specific for myelin basic protein” by Wucherpfennig KW, Strominger JL. Cell. 1995;80:695–705 (https://www.cell.com/cell/pdf/0092-8674(95)90348-8.pdf?_returnURL=https%3A%2F%2Flinkinghub.elsevier.com%2Fretrieve%2Fpii%2F0092867495903488%3Fshowall%3Dtrue). © 1995, Cell Press.